Breaking barriers in Candida spp. detection with Electronic Noses and artificial intelligence.

The timely and accurate diagnosis of candidemia, a severe bloodstream infection caused by Candida spp., remains challenging in clinical practice. Blood culture, the current gold standard technique, suffers from lengthy turnaround times and limited sensitivity. To address these limitations, we propose a novel approach utilizing an Electronic Nose (E-nose) combined with Time Series-based classification techniques to analyze and identify Candida spp. rapidly, using culture species of C. albicans, C.kodamaea ohmeri, C. glabrara, C. haemulonii, C. parapsilosis and C. krusei as control samples. This innovative method not only enhances diagnostic accuracy and reduces decision time for healthcare professionals in selecting appropriate treatments but also offers the potential for expanded usage and cost reduction due to the E-nose's low production costs. Our proof-of-concept experimental results, carried out with culture samples, demonstrate promising outcomes, with the Inception Time classifier achieving an impressive average accuracy of 97.46% during the test phase. This paper presents a groundbreaking advancement in the field, empowering medical practitioners with an efficient and reliable tool for early and precise identification of candidemia, ultimately leading to improved patient outcomes.

Multi-center Integrating Radiomics, Structured Reports, and Machine Learning Algorithms for Assisted Classification of COVID-19 in Lung Computed Tomography.

Purpose: To evaluate the classification performance of structured report features, radiomics, and machine learning (ML) models to differentiate between Coronavirus Disease 2019 (COVID-19) and other types of pneumonia using chest computed tomography (CT) scans. Methods: Sixty-four COVID-19 subjects and 64 subjects with non-COVID-19 pneumonia were selected. The data was split into two independent cohorts: one for the structured report, radiomic feature selection and model building (n = 73), and another for model validation (n = 55). Physicians performed readings with and without machine learning support. The model's sensitivity and specificity were calculated, and inter-rater reliability was assessed using Cohen's Kappa agreement coefficient. Results: Physicians performed with mean sensitivity and specificity of 83.4 and 64.3%, respectively. When assisted with machine learning, the mean sensitivity and specificity increased to 87.1 and 91.1%, respectively. In addition, machine learning improved the inter-rater reliability from moderate to substantial. Conclusion: Integrating structured reports and radiomics promises assisted classification of COVID-19 in CT chest scans.

Entropic Out-of-Distribution Detection: Seamless Detection of Unknown Examples.

In this article, we argue that the unsatisfactory out-of-distribution (OOD) detection performance of neural networks is mainly due to the SoftMax loss anisotropy and propensity to produce low entropy probability distributions in disagreement with the principle of maximum entropy. On the one hand, current OOD detection approaches usually do not directly fix the SoftMax loss drawbacks, but rather build techniques to circumvent it. Unfortunately, those methods usually produce undesired side effects (e.g., classification accuracy drop, additional hyperparameters, slower inferences, and collecting extra data). On the other hand, we propose replacing SoftMax loss with a novel loss function that does not suffer from the mentioned weaknesses. The proposed IsoMax loss is isotropic (exclusively distance-based) and provides high entropy posterior probability distributions. Replacing the SoftMax loss by IsoMax loss requires no model or training changes. Additionally, the models trained with IsoMax loss produce as fast and energy-efficient inferences as those trained using SoftMax loss. Moreover, no classification accuracy drop is observed. The proposed method does not rely on outlier/background data, hyperparameter tuning, temperature calibration, feature extraction, metric learning, adversarial training, ensemble procedures, or generative models. Our experiments showed that IsoMax loss works as a seamless SoftMax loss drop-in replacement that significantly improves neural networks' OOD detection performance. Hence, it may be used as a baseline OOD detection approach to be combined with current or future OOD detection techniques to achieve even higher results.

QRNN: $q$ -Generalized Random Neural Network.

Artificial neural networks (ANNs) are widely used in applications with complex decision boundaries. A large number of activation functions have been proposed in the literature to achieve better representations of the observed data. However, only a few works employ Tsallis statistics, which has successfully been applied to various other fields. This paper presents a random neural network (RNN) with q -Gaussian activation functions [ q -generalized RNN (QRNN)] based on Tsallis statistics. The proposed method employs an additional parameter q (called the entropic index) which reflects the degree of nonextensivity. This approach has the flexibility to model complex decision boundaries of different shapes by varying the entropic index. We conduct numerical experiments to analyze the efficiency of QRNN compared with RNNs and several other classical methods. Statistical tests (Wilcoxon and Friedman) are used to validate our results and show that the QRNN performs significantly better than RNNs with different activation functions. In addition, we find that QRNN outperforms many of the compared classical methods, with the exception of support vector machines, in which case it still exhibits a substantial advantage in terms of implementation simplicity and speed.

An optimization methodology for neural network weights and architectures.

This paper introduces a methodology for neural network global optimization. The aim is the simultaneous optimization of multilayer perceptron (MLP) network weights and architectures, in order to generate topologies with few connections and high classification performance for any data sets. The approach combines the advantages of simulated annealing, tabu search and the backpropagation training algorithm in order to generate an automatic process for producing networks with high classification performance and low complexity. Experimental results obtained with four classification problems and one prediction problem has shown to be better than those obtained by the most commonly used optimization techniques.

Hybrid neural systems for pattern recognition in artificial noses.

This work examines the use of Hybrid Intelligent Systems in the pattern recognition system of an artificial nose. The connectionist approaches Multi-Layer Perceptron and Time Delay Neural Networks, and the hybrid approaches Feature-Weighted Detector and Evolving Neural Fuzzy Networks were investigated. A Wavelet Filter is evaluated as a preprocessing method for odor signals. The signals generated by an artificial nose were composed by an array of conducting polymer sensors and exposed to two different odor databases.